Research Pilot Projects Program, 2025–2027 “Role of Structured ncRNAs in regulating Ribo-Proteostasis and RNA Metabolism: Implications for Neurodegenerative Diseases”

Research Areas

  • Ribo-Proteostasis in Neurodegenerative Diseases
  • Biomolecular Condensates in Neurodegenerative Diseases
  • Neuronal Mosaicism
  • 3D-Organoids for Neurodegenerative Diseases Modelling

Scientific Achievements

  • Dr. Bajaj has made impactful contributions to our understanding of cellular pathways relevant to neurological diseases.
  • He has co-authored numerous influential publications on lysosome biogenesis, stress granule dynamics, and neurodegenerative disease models, including work in Nature Communications, Journal of Experimental Medicine, Journal of Clinical Investigation, and Cell Discovery.
  • His research has garnered significant citations across the field, reflecting both depth and influence in molecular neurobiology and cell biology.
  • Earlier work during his doctoral studies helped elucidate mechanisms of lysosomal enzyme trafficking, which are foundational to understanding disorders like Batten disease.

Funding

RCMI Funding:

  • NIH/NIMHD U54MD007600

Other Recent Funding:

  • NIMHD RCMI Seed Award (UPR Medical Sciences Campus), 2024–2025 (PI): Identifying Structured RNA Motifs in Stress Granules as Therapeutic Targets in ALS.
  • Deanship of Research Seed award (UPR Medical Sciences Campus), 2024–2025 (PI): Role of TFEB and autophagy in disassembly of Stress Granules after acute stress in ALS.

Scientific Advance

Calpain activity is negatively regulated by a KCTD7–Cullin-3 complex via non-degradative ubiquitination
Published in Nature-Cell Discovery, Volume 9, 2023, PMID: 36964131
This study clarifies a previously unknown mechanism that controls the activity of calpain proteases, enzymes that regulate protein processing and can contribute to neurological disease when dysregulated. The researchers found that KCTD7 partners with Cullin-3 to attach specific ubiquitin chains to calpains, not to target them for degradation, but to tune their activity. When this tagging mechanism is disrupted, such as in certain genetic deficiencies, calpains become hyperactive, driving excessive protein cleavage, activation of cell death pathways, and neurodegeneration. In mouse models, loss of KCTD7 led to brain degeneration and behavioral changes, and inhibiting calpain activity reduced these harmful effects, pointing to a potential therapeutic strategy for calpain-associated neurological disorders.
NIH Grant NS079618 / Beyond Batten Disease Foundation Grant NIH Grant 1U54 HD083092 (IDDRC)
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